Remove unused imports. Fix typing and indentation

- Typing issues discovered using `mypy'. Fixed manually
- Unused imports discovered and fixed using `autoflake'
- Fix indentation in `org_to_jsonl' manually

src/configure.py

@@ -12,7 +12,7 @@ from src.processor.org_mode.org_to_jsonl import org_to_jsonl
 from src.search_type import image_search, text_search
 from src.utils.config import SearchType, SearchModels, ProcessorConfigModel, ConversationProcessorConfigModel
 from src.utils import state
-from src.utils.helpers import resolve_absolute_path
+from src.utils.helpers import LRU, resolve_absolute_path
 from src.utils.rawconfig import FullConfig, ProcessorConfig
 from src.search_filter.date_filter import DateFilter
 from src.search_filter.word_filter import WordFilter
@@ -89,7 +89,7 @@ def configure_search(model: SearchModels, config: FullConfig, regenerate: bool,
             regenerate=regenerate)
 
     # Invalidate Query Cache
-    state.query_cache = {}
+    state.query_cache = LRU()
 
     return model
 

src/interface/desktop/system_tray.py

@@ -6,9 +6,10 @@ from PyQt6 import QtGui, QtWidgets
 
 # Internal Packages
 from src.utils import constants, state
+from src.interface.desktop.main_window import MainWindow
 
 
-def create_system_tray(gui: QtWidgets.QApplication, main_window: QtWidgets.QMainWindow):
+def create_system_tray(gui: QtWidgets.QApplication, main_window: MainWindow):
     """Create System Tray with Menu.  Menu contain options to
     1. Open Search Page on the Web Interface
     2. Open App Configuration Screen

src/main.py

@@ -42,14 +42,14 @@ class CustomFormatter(logging.Formatter):
     red = "\x1b[31;20m"
     bold_red = "\x1b[31;1m"
     reset = "\x1b[0m"
-    format = "%(levelname)s: %(asctime)s: %(name)s | %(message)s"
+    format_str = "%(levelname)s: %(asctime)s: %(name)s | %(message)s"
 
     FORMATS = {
-        logging.DEBUG: blue + format + reset,
+        logging.DEBUG: blue + format_str + reset,
-        logging.INFO: green + format + reset,
+        logging.INFO: green + format_str + reset,
-        logging.WARNING: yellow + format + reset,
+        logging.WARNING: yellow + format_str + reset,
-        logging.ERROR: red + format + reset,
+        logging.ERROR: red + format_str + reset,
-        logging.CRITICAL: bold_red + format + reset
+        logging.CRITICAL: bold_red + format_str + reset
     }
 
     def format(self, record):

src/processor/ledger/beancount_to_jsonl.py

@@ -2,8 +2,6 @@
 
 # Standard Packages
 import json
-import argparse
-import pathlib
 import glob
 import re
 import logging

src/processor/markdown/markdown_to_jsonl.py

@@ -2,8 +2,6 @@
 
 # Standard Packages
 import json
-import argparse
-import pathlib
 import glob
 import re
 import logging

src/processor/org_mode/org_to_jsonl.py

@@ -1,13 +1,11 @@
 #!/usr/bin/env python3
 
 # Standard Packages
-import re
 import json
-import argparse
-import pathlib
 import glob
 import logging
 import time
+from typing import Iterable
 
 # Internal Packages
 from src.processor.org_mode import orgnode
@@ -50,7 +48,7 @@ def org_to_jsonl(config: TextContentConfig, previous_entries=None):
     if not previous_entries:
         entries_with_ids = list(enumerate(current_entries))
     else:
-       entries_with_ids = mark_entries_for_update(current_entries, previous_entries, key='compiled', logger=logger)
+        entries_with_ids = mark_entries_for_update(current_entries, previous_entries, key='compiled', logger=logger)
 
     # Process Each Entry from All Notes Files
     start = time.time()
@@ -72,9 +70,11 @@ def get_org_files(org_files=None, org_file_filters=None):
     "Get Org files to process"
     absolute_org_files, filtered_org_files = set(), set()
     if org_files:
-        absolute_org_files = {get_absolute_path(org_file)
+        absolute_org_files = {
-                              for org_file
+            get_absolute_path(org_file)
-                              in org_files}
+            for org_file
+            in org_files
+        }
     if org_file_filters:
         filtered_org_files = {
             filtered_file
@@ -150,6 +150,6 @@ def convert_org_nodes_to_entries(entries: list[orgnode.Orgnode], entry_to_file_m
     return entry_maps
 
 
-def convert_org_entries_to_jsonl(entries: list[dict]) -> str:
+def convert_org_entries_to_jsonl(entries: Iterable[dict]) -> str:
     "Convert each Org-Mode entry to JSON and collate as JSONL"
     return ''.join([f'{json.dumps(entry_dict, ensure_ascii=False)}\n' for entry_dict in entries])

src/router.py

@@ -17,14 +17,14 @@ from src.search_type import image_search, text_search
 from src.processor.conversation.gpt import converse, extract_search_type, message_to_log, message_to_prompt, understand, summarize
 from src.utils.rawconfig import FullConfig
 from src.utils.config import SearchType
-from src.utils.helpers import get_absolute_path, get_from_dict
+from src.utils.helpers import LRU, get_absolute_path, get_from_dict
 from src.utils import state, constants
 
 
 router = APIRouter()
 templates = Jinja2Templates(directory=constants.web_directory)
 logger = logging.getLogger(__name__)
-query_cache = {}
+query_cache = LRU()
 
 
 @router.get("/", response_class=FileResponse)

src/search_filter/base_filter.py

@@ -1,9 +1,5 @@
 # Standard Packages
 from abc import ABC, abstractmethod
-from typing import List, Set, Tuple
-
-# External Packages
-import torch
 
 
 class BaseFilter(ABC):
@@ -16,5 +12,5 @@ class BaseFilter(ABC):
         pass
 
     @abstractmethod
-    def apply(self, query:str, raw_entries:List[str]) -> Tuple[str, Set[int]]:
+    def apply(self, query:str, raw_entries:list[str]) -> tuple[str, set[int]]:
         pass

src/search_type/image_search.py

@@ -1,5 +1,4 @@
 # Standard Packages
-import argparse
 import glob
 import pathlib
 import copy

src/search_type/text_search.py

@@ -1,6 +1,4 @@
 # Standard Packages
-import argparse
-import pathlib
 import logging
 import time
 

src/utils/config.py

@@ -2,7 +2,6 @@
 from enum import Enum
 from dataclasses import dataclass
 from pathlib import Path
-from typing import List
 
 # Internal Packages
 from src.utils.rawconfig import ConversationProcessorConfig
@@ -22,7 +21,7 @@ class ProcessorType(str, Enum):
 
 
 class TextSearchModel():
-    def __init__(self, entries, corpus_embeddings, bi_encoder, cross_encoder, filters: List[BaseFilter], top_k):
+    def __init__(self, entries, corpus_embeddings, bi_encoder, cross_encoder, filters: list[BaseFilter], top_k):
         self.entries = entries
         self.corpus_embeddings = corpus_embeddings
         self.bi_encoder = bi_encoder
@@ -54,7 +53,7 @@ class ConversationProcessorConfigModel():
         self.openai_api_key = processor_config.openai_api_key
         self.conversation_logfile = Path(processor_config.conversation_logfile)
         self.chat_session = ''
-        self.meta_log = []
+        self.meta_log: dict = {}
 
 
 @dataclass

src/utils/helpers.py

@@ -1,10 +1,11 @@
 # Standard Packages
-import pathlib
+from pathlib import Path
 import sys
 import time
 import hashlib
 from os.path import join
 from collections import OrderedDict
+from typing import Optional, Union
 
 
 def is_none_or_empty(item):
@@ -15,12 +16,12 @@ def to_snake_case_from_dash(item: str):
     return item.replace('_', '-')
 
 
-def get_absolute_path(filepath):
+def get_absolute_path(filepath: Union[str, Path]) -> str:
-    return str(pathlib.Path(filepath).expanduser().absolute())
+    return str(Path(filepath).expanduser().absolute())
 
 
-def resolve_absolute_path(filepath, strict=False):
+def resolve_absolute_path(filepath: Union[str, Optional[Path]], strict=False) -> Path:
-    return pathlib.Path(filepath).expanduser().absolute().resolve(strict=strict)
+    return Path(filepath).expanduser().absolute().resolve(strict=strict)
 
 
 def get_from_dict(dictionary, *args):

src/utils/state.py

@@ -1,5 +1,6 @@
 # Standard Packages
 from packaging import version
+
 # External Packages
 import torch
 from pathlib import Path
@@ -13,11 +14,11 @@ from src.utils.rawconfig import FullConfig
 config = FullConfig()
 model = SearchModels()
 processor_config = ProcessorConfigModel()
-config_file: Path = ""
+config_file: Path = None
 verbose: int = 0
 host: str = None
 port: int = None
-cli_args = None
+cli_args: list[str] = None
 query_cache = LRU()
 
 if torch.cuda.is_available():

src/utils/yaml.py

@@ -5,12 +5,13 @@ from pathlib import Path
 import yaml
 
 # Internal Packages
-from src.utils.helpers import get_absolute_path, resolve_absolute_path
 from src.utils.rawconfig import FullConfig
 
+
 # Do not emit tags when dumping to YAML
 yaml.emitter.Emitter.process_tag = lambda self, *args, **kwargs: None
 
+
 def save_config_to_file(yaml_config: dict, yaml_config_file: Path):
     "Write config to YML file"
     # Create output directory, if it doesn't exist